Insertion junction: LMJ.RY0402.129487_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.129487
Chromosome:chromosome 12
Location:866925
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g495955 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTTAGGACGCCCCTCAGTCACCAACTG
Internal bar code:GTATGCGAACTCCTACCCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:172
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGGTTATCCACTTCGG
Suggested primer 2:TCCGGTAATCCTTTGTCAGG