| Common name: | |
| Defline: | (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) |
| Description: | |
| Synonyms: | g12145.t1 |
| Chromosome: | chromosome 12 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.050710_1 | CLIP2.050710 | CDS | 80 | 6.1 |
| CLIP2.050710_2 | CLIP2.050710 | CDS | 80 | 6.1 |
| LMJ.RY0402.072839_1 | LMJ.RY0402.072839 | CDS | 58 | 5.5 |
| LMJ.RY0402.090749_1 | LMJ.RY0402.090749 | CDS | 73 | 5.5 |
| LMJ.RY0402.129487_1 | LMJ.RY0402.129487 | CDS | 73 | 5.5 |
| LMJ.RY0402.154813_1 | LMJ.RY0402.154813 | CDS | 73 | 5.5 |
| LMJ.RY0402.177311_1 | LMJ.RY0402.177311 | CDS | 73 | 5.5 |
| LMJ.RY0402.226775_3 | LMJ.RY0402.226775 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.237797_2 | LMJ.RY0402.237797 | CDS | 73 | 5.5 |
| PFAM: | PF00078 |
| PANTHER: | PTHR19446 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003723, GO:0003964, GO:0006278 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Paromomycin, screen 3 of 6 ( 78% confidence (FDR = 0.22)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.