Insertion junction: LMJ.RY0402.154813_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.154813
Chromosome:chromosome 12
Location:866924
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g495955 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTTAGGACGCCCCTCAGTCACCAACT
Internal bar code:AGCGGAACGCATTTTCGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:98.3836
LEAP-Seq n confirming:913
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGTAATCCTTTGTCAGG
Suggested primer 2:TTGGAGGTTATCCACTTCGG