Insertion junction: LMJ.RY0402.177311_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.177311
Chromosome:chromosome 12
Location:866927
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g495955 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTAGGACGCCCCTCAGTCACCAACTGCG
Internal bar code:GGGCCGTAACGCACGAAAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:700
LEAP-Seq percent confirming:99.707
LEAP-Seq n confirming:1361
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGTAATCCTTTGTCAGG
Suggested primer 2:TTGGAGGTTATCCACTTCGG