Insertion junction: LMJ.RY0402.130256_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.130256
Chromosome:chromosome 3
Location:5885541
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g189800 CYN38 Cyclophilin 38; (1 of 1) PTHR11071//PTHR11071:SF236 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP38, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGAGTTTTCGTGTAAAAATCCGAGGT
Internal bar code:CACACACTGGATCCCGTCCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:580
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:316
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAATGAGTTTGAGAACA
Suggested primer 2:AACGTCCTGGGTTCAGACAC