Insertion junction: LMJ.RY0402.130597_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.130597
Chromosome:chromosome 10
Location:2590358
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCACGGACGTGATGGTCGCCATGGAGC
Internal bar code:ACGGATACTTGGGGTTGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:98.6136
LEAP-Seq n confirming:5975
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACAAGCTGCTGAAGGAC
Suggested primer 2:AACGTGCTGCTGAATGACTG