Insertion junction: LMJ.RY0402.130655_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.130655
Chromosome:chromosome 6
Location:3141441
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTCGGAGGCGACCGTGGCGGCTGTAGC
Internal bar code:CTTCCCAGTGGGATTATACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGCAGAAGGGTTCTCG
Suggested primer 2:TGGCGGAAAATTGAAGGTAG