Insertion junction: LMJ.RY0402.131571_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.131571
Chromosome:chromosome 3
Location:3751565
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g169850 TSC1 (1 of 1) PTHR10890:SF3 - CYSTEINE--TRNA LIGASE, CYTOPLASMIC; Cysteinyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCGAGATGGCACGGCGCCCGCCGCGC
Internal bar code:CCTAGGACGTACCATATGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:72.5204
LEAP-Seq n confirming:2040
LEAP-Seq n nonconfirming:773
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGAAGAAGCGGTCGTT
Suggested primer 2:CCTTCTCCTTCCTCCAGCTT