Insertion junction: LMJ.RY0402.133753_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.133753
Chromosome:chromosome 3
Location:1896107
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCGCAATCGAGTTGCCGTTCTAAGCCG
Internal bar code:TAGCATACAACTGGTTATAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:99.7679
LEAP-Seq n confirming:2579
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGGGATTGTAGACTGGT
Suggested primer 2:GTAGCGTCGGTTTTGGTCAT