Insertion junction: LMJ.RY0402.134339_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.134339
Chromosome:chromosome 11
Location:1318753
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGCACAAGGTGACAGGCTCGATAATGT
Internal bar code:GCTGGGCTCCGTCTCGCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:117
LEAP-Seq percent confirming:96.1326
LEAP-Seq n confirming:174
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCCCTGACACACAGACC
Suggested primer 2:AGGAGGGAGTCCGAATGTTT