Insertion junction: LMJ.RY0402.135320_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.135320
Chromosome:chromosome 7
Location:6202319
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g356350 DXS1 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCACACGCACCGTGACCCATGAAATGG
Internal bar code:GCTCTGTCCGCGCGGGCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:728
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTTCACGCTGCGAATCA
Suggested primer 2:TGACAAGAGTGGCAGACAGG