Gene: Cre07.g356350
Overview
| Common name: | DXS1 |
| Defline: | 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor |
| Description: | 1-deoxy-D-xylulose 5-phosphate synthase (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) (CLA1) (DEF), chloroplast precursor |
| Synonyms: | g8285.t1,DXS1 |
| Chromosome: | chromosome 7 |
Protein Localization
A plasmid for expressing Cre07.g356350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g356350-Venus-3xFLAG
Imaged strain: CSI_LW07H1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/chloroplast punctate dots
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre03.g145507 | Cre07.g356350 | DXS1 | Wang et al. 2023 | |
| Cre03.g197650 | Cre07.g356350 | DXS1 | Wang et al. 2023 | |
| Cre07.g356350 | DXS1 | Cre02.g141400 | PCK1 | Wang et al. 2023 |
| Cre07.g356350 | DXS1 | Cre03.g206550 | CPLD2,PGP5 | Wang et al. 2023 |
| Cre07.g356350 | DXS1 | Cre09.g405701 | Wang et al. 2023 | |
| Cre07.g356350 | DXS1 | Cre10.g452250 | FAP41 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| LMJ.RY0402.084323_1 | LMJ.RY0402.084323 | intron | 73 | 5.5 |
| LMJ.RY0402.135320_1 | LMJ.RY0402.135320 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.135320_2 | LMJ.RY0402.135320 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00676, PF02779, PF02780 |
| PANTHER: | PTHR11624 PTHR11624:SF20 |
| KEGG_ec: | 2.2.1.7 |
| KEGG_orthology: | K01662 |
| KOG: | KOG0523 |
| Gene ontology terms:: | GO:0008152, GO:0016624, GO:0003824 |
| Best arabidopsis TAIR name: | AT4G15560.1 |
| Best arabidopsis TAIR symbol: | CLA,CLA1,DEF,DXPS2,DXS |
| Best arabidopsis TAIR defline: | Deoxyxylulose-5-phosphate synthase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.