Insertion junction: LMJ.RY0402.138655_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.138655
Chromosome:chromosome 9
Location:3083524
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387000 CGL34 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGATGCGTGTGTGACATGAGTGTGCATG
Internal bar code:TGAGCGATGCATACTGTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:99.5529
LEAP-Seq n confirming:16031
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGAAGTCCCGTAGTCC
Suggested primer 2:CAAGTACGTGGACCCCAACT