Insertion junction: LMJ.RY0402.138655_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.138655
Chromosome:chromosome 9
Location:3083528
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387000 CGL34 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATAAAGAAACCTGATTTTGTACACCGG
Internal bar code:CAGCCGTGCTCTGATTTGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:98.4717
LEAP-Seq n confirming:8956
LEAP-Seq n nonconfirming:139
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGAAGTCCCGTAGTCC
Suggested primer 2:CAAGTACGTGGACCCCAACT