Insertion junction: LMJ.RY0402.138786_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.138786
Chromosome:chromosome 2
Location:3383400
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g095102 VPS5C (1 of 4) PTHR10555:SF84 - SORTING NEXIN-8; Subunit of Retromer complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTAATGGACGTGTGCGTGTCCGTGT
Internal bar code:AATTAGGATGAAACTTTGACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:95.936
LEAP-Seq n confirming:21222
LEAP-Seq n nonconfirming:899
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAACAAAGCGCACAGACA
Suggested primer 2:AGAAAGCAGCAATCAGGCAT