Insertion junction: LMJ.RY0402.140678_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.140678
Chromosome:chromosome 17
Location:3880457
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTGGTGTCTCGGCATCCGGAGGGGCC
Internal bar code:GGTCCCCCACTTGCCAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:90.4838
LEAP-Seq n confirming:3404
LEAP-Seq n nonconfirming:358
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGTATCCTGCCCAGAG
Suggested primer 2:GGGCAATGCAGGTTTAGTGT