Insertion junction: LMJ.RY0402.141265_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.141265
Chromosome:chromosome 6
Location:3147898
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGACGCGTGCGTCATCGCCGCCACCG
Internal bar code:TCGTACGGGGCAAAGGTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:99.7021
LEAP-Seq n confirming:6025
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAAGCTTCATCGCAATC
Suggested primer 2:CGTGGTGTGTGTGTGTGTGT