Insertion junction: LMJ.RY0402.143446_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143446
Chromosome:chromosome 3
Location:1885964
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACAAAAGTTGGTTGCCCGCCAGTCGG
Internal bar code:TGGTGGTGTAGGAGGAGAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:99.7248
LEAP-Seq n confirming:1812
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGGCGCTAGTCAACAA
Suggested primer 2:CATGACTACCAACACACCCG