Insertion junction: LMJ.RY0402.145341_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.145341
Chromosome:chromosome 3
Location:5761570
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g188500 VPS46 Subunit of the ESCRT-III complex; (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGAGACCAGCGAGACGAAGGATATAGT
Internal bar code:GCTGAGACACAGGATTTCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:99.5837
LEAP-Seq n confirming:1196
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGAGGTACAGGTGGAA
Suggested primer 2:CTTCAGAACTTCACGAGGGC