Gene: Cre03.g188500

Overview

Common name:	VPS46
Defline:	Subunit of the ESCRT-III complex; (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2)
Description:	Expressed Protein. Similar to yeast Did2p/Vps46p, SNF7-domain protein, component of the ESCRT-III complex involved in the ubiquitin-mediated internalization into the multi-vesicular bodies (late endosomes)
Synonyms:	VPS46,g3904.t1,Cre03.g188500.t1.1
Chromosome:	chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.024113_1	CLIP2.024113	intron	80	6.1
CLIP2.024113_2	CLIP2.024113	intron	80	6.1
CLIP2.028414_1	CLIP2.028414	intron	80	6.1
CLIP2.028414_2	CLIP2.028414	intron	80	6.1
CLIP2.037951_1	CLIP2.037951	CDS	80	6.1
CLIP2.037951_2	CLIP2.037951	CDS	80	6.1
CLIP2.038542_1	CLIP2.038542	intron	80	6.1
CLIP2.038542_2	CLIP2.038542	intron	80	6.1
CLIP2.055199_1	CLIP2.055199	intron	80	6.1
CLIP2.055199_2	CLIP2.055199	intron	80	6.1
LMJ.RY0402.043807_1	LMJ.RY0402.043807	CDS	58	5.5
LMJ.RY0402.057532_2	LMJ.RY0402.057532	CDS	95	5.5
LMJ.RY0402.057532_3	LMJ.RY0402.057532	CDS	95	5.5
LMJ.RY0402.060239_1	LMJ.RY0402.060239	CDS	95	5.5
LMJ.RY0402.060239_2	LMJ.RY0402.060239	CDS	95	5.5
LMJ.RY0402.092591_1	LMJ.RY0402.092591	CDS	73	5.5
LMJ.RY0402.099436_1	LMJ.RY0402.099436	intron	73	5.5
LMJ.RY0402.139185_1	LMJ.RY0402.139185	5'UTR_intron	73	5.5
LMJ.RY0402.145341_1	LMJ.RY0402.145341	5'UTR	95	5.5
LMJ.RY0402.145341_2	LMJ.RY0402.145341	5'UTR	95	5.5
LMJ.RY0402.162968_1	LMJ.RY0402.162968	3'UTR	95	5.5
LMJ.RY0402.162968_2	LMJ.RY0402.162968	3'UTR	95	5.5
LMJ.RY0402.166319_1	LMJ.RY0402.166319	CDS	73	5.5
LMJ.RY0402.176583_1	LMJ.RY0402.176583	CDS	95	5.5
LMJ.RY0402.176583_2	LMJ.RY0402.176583	CDS	95	5.5
LMJ.RY0402.200763_1	LMJ.RY0402.200763	5'UTR_intron	73	5.5
LMJ.RY0402.203308_1	LMJ.RY0402.203308	5'UTR	95	5.5
LMJ.RY0402.203308_2	LMJ.RY0402.203308	5'UTR_intron	95	5.5
LMJ.RY0402.230975_2	LMJ.RY0402.230975	5'UTR	95	5.5
LMJ.RY0402.248387_2	LMJ.RY0402.248387	intron	95	5.5
LMJ.RY0402.248387_3	LMJ.RY0402.248387	intron	95	5.5
LMJ.RY0402.256951_1	LMJ.RY0402.256951	intron	73	5.5

Gene Annotations

PFAM:	PF03357
PANTHER:	PTHR10476 PTHR10476:SF2
KEGG_ec:
KEGG_orthology:	K12197
KOG:	KOG3232
Gene ontology terms::	GO:0007034
Best arabidopsis TAIR name:	AT1G73030
Best arabidopsis TAIR symbol:	CHMP1B,VPS46.1
Best arabidopsis TAIR defline:	SNF7 family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.