Insertion junction: LMJ.RY0402.256951_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.256951
Chromosome:chromosome 3
Location:5763235
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g188500 VPS46 Subunit of the ESCRT-III complex; (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGGCACCATCCAGTCGTGCCGCGGAC
Internal bar code:TCCATTAAGAACGTAGTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCTTGGGACACACACAC
Suggested primer 2:GCCCTCGTGAAGTTCTGAAG