Insertion junction: LMJ.RY0402.145927_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145927
Chromosome:chromosome 4
Location:3730069
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g229300 RCA1 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase 1, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGGGCAGGTCCTGCATAGAGGGGAGC
Internal bar code:GCACTTTCGGGGGTTCCCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:99.7981
LEAP-Seq n confirming:2471
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCTCTCTTTCATTCCC
Suggested primer 2:CTCTCTCTCCTTACGCCCCT