Insertion junction: LMJ.RY0402.145938_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145938
Chromosome:chromosome 3
Location:6314025
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACGGGAGGGACCATTGTCGTGCAAGCT
Internal bar code:CGCAGGGGCACCTGGCAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:90.5906
LEAP-Seq n confirming:1810
LEAP-Seq n nonconfirming:188
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCTGAGTACGACCTTCC
Suggested primer 2:GCAGCTACAACGGAAAGGAG