Insertion junction: LMJ.RY0402.157031_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.157031
Chromosome:chromosome 16
Location:6761960
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g673617 PRF1,PRFA1 Putative chloroplast peptide chain release factor 1; (1 of 2) PTHR11075:SF9 - PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGTCCAGCGGAGCAACCGATATTTAAG
Internal bar code:TATCTGGTTACCACTATCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:95.0368
LEAP-Seq n confirming:517
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGGAGCGTGTGCTCTTG
Suggested primer 2:AAACCCAACAGGAAGTGTGC