Insertion junction: LMJ.RY0402.157553_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.157553
Chromosome:chromosome 2
Location:2001495
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGAAACTTGGAAAGGGTTCGTAAGAA
Internal bar code:GGAACGTACGCAAAAGCCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:99.7763
LEAP-Seq n confirming:1784
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTACGCCTTCACTTCTT
Suggested primer 2:GCCCACCTTGTACGCAGTAT