Insertion junction: LMJ.RY0402.157684_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157684
Chromosome:chromosome 11
Location:1327334
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACACTCATGAATGCGATCCCACTCACA
Internal bar code:TGTACTGCAGCATTCCTGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:76.1002
LEAP-Seq n confirming:1124
LEAP-Seq n nonconfirming:353
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGAGCTGAACTGATTCG
Suggested primer 2:ACCTTGGTTGCTTTGGTTTG