Insertion junction: LMJ.RY0402.161852_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.161852
Chromosome:chromosome 11
Location:1320648
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCCGCAGCTGTACGACACGCGAGTGG
Internal bar code:CTCGCAACGAGTTATGGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:98.3193
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGAGCAAGTGTTTGTGTT
Suggested primer 2:CTCCTCCCACTCCTACTCCC