Insertion junction: LMJ.RY0402.164305_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.164305
Chromosome:chromosome 2
Location:1997507
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATGGTAAGCTGCTCCTCCGGCGTCAT
Internal bar code:GACTGCGGACATCCACAGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:99.8029
LEAP-Seq n confirming:1519
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTCCTGGTCCTGTTGT
Suggested primer 2:GAAGAAAAAGGCTGTGCTGG