Insertion junction: LMJ.RY0402.167292_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.167292
Chromosome:chromosome 9
Location:679789
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g402950 CGL21 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCAATCCCAATTCCCAAATATGCCGAG
Internal bar code:GCGCCGTTGGTCTTGTAGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:57.9229
LEAP-Seq n confirming:1517
LEAP-Seq n nonconfirming:1102
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAAGAACCCCAACATCA
Suggested primer 2:AAAGCAAAACAAGAGGCGAA