Insertion junction: LMJ.RY0402.167864_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.167864
Chromosome:chromosome 6
Location:4115633
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278221 TSSP1,TPS1,TSPSP1 (1 of 1) 2.4.1.15//3.1.3.12 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase // Trehalose-phosphatase / Trehalose 6-phosphate phosphatase; Trehalose-6-phosphate synthase/phosphatase, class I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGCGTTCCCAAACGCCTGCCTCCATC
Internal bar code:CCTAAAGTCTGGTGGCCCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:94.7853
LEAP-Seq n confirming:2472
LEAP-Seq n nonconfirming:136
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAAAATACCAGCCCAACC
Suggested primer 2:GTTGGTTGGGTGGGTTACAG