Insertion junction: LMJ.RY0402.171618_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.171618
Chromosome:chromosome 17
Location:3867248
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACGCCTCCAAAGTAGCCGCTCTCACC
Internal bar code:ACTTTATCTACACCGCGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:72.549
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTTGAATGCAGCCCTTT
Suggested primer 2:CTTAGACACCAACGTGGCAA