Insertion junction: LMJ.RY0402.171658_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.171658
Chromosome:chromosome 6
Location:6170120
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g290400 HDA5 (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGACGACGCGCGCACAACACCGCGGCG
Internal bar code:CTCGCATACGCCTTGGGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:80.263
LEAP-Seq n confirming:78197
LEAP-Seq n nonconfirming:19229
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGCTACTGCAAGAAAC
Suggested primer 2:AGGCTGAACGGCTAAAGACA