Insertion junction: LMJ.RY0402.171968_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.171968
Chromosome:chromosome 2
Location:3477097
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095121 PUS9 (1 of 1) PTHR21600//PTHR21600:SF11 - RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B // PSEUDOURIDINE SYNTHASE FAMILY PROTEIN; RNA pseudouridine synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGGAAGGGGAGCAGATGCCTGAGCAGA
Internal bar code:AATGCCCTCATGGGTAGTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGTAGAGGCACCCTTG
Suggested primer 2:CTAACATGCCCACACGAATG