| Common name: | PUS9 |
| Defline: | (1 of 1) PTHR21600//PTHR21600:SF11 - RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B // PSEUDOURIDINE SYNTHASE FAMILY PROTEIN; RNA pseudouridine synthase |
| Description: | |
| Synonyms: | g1894.t1,PUS9 |
| Chromosome: | chromosome 11 (genome version v6.1), chromosome 2 (genome version v5.5) |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.010159_1 | CLIP2.010159 | intron | 80 | 6.1 |
| CLIP2.010159_2 | CLIP2.010159 | intron | 80 | 6.1 |
| CLIP2.019134_1 | CLIP2.019134 | intron | 80 | 6.1 |
| CLIP2.019134_2 | CLIP2.019134 | intron | 80 | 6.1 |
| CLIP2.024955_1 | CLIP2.024955 | intron | 80 | 6.1 |
| CLIP2.024955_2 | CLIP2.024955 | intron | 80 | 6.1 |
| CLIP2.071174_2 | CLIP2.071174 | intron | 63 | 6.1 |
| LMJ.RY0402.052798_1 | LMJ.RY0402.052798 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.056302_1 | LMJ.RY0402.056302 | intron | 73 | 5.5 |
| LMJ.RY0402.059180_1 | LMJ.RY0402.059180 | intron | 73 | 5.5 |
| LMJ.RY0402.075120_1 | LMJ.RY0402.075120 | intron | 73 | 5.5 |
| LMJ.RY0402.171968_1 | LMJ.RY0402.171968 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.171968_2 | LMJ.RY0402.171968 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.230786_1 | LMJ.RY0402.230786 | 3'UTR | 73 | 5.5 |
| PFAM: | PF00849, PF01479 |
| PANTHER: | PTHR21600 PTHR21600:SF11 |
| KEGG_ec: | EC:5.4.99.19 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0001522, GO:0003723, GO:0009451, GO:0009982, GO:0016866, GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT2G39140 |
| Best arabidopsis TAIR symbol: | SVR1 |
| Best arabidopsis TAIR defline: | pseudouridine synthase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.