Insertion junction: LMJ.RY0402.172449_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172449
Chromosome:chromosome 1
Location:497956
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g002787 SRR24A,SRR24 (1 of 1) PF00059//PF00530//PF00704//PF03762 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // Vitelline membrane outer layer protein I (VOMI) (VOMI); Scavenger receptor cysteine-rich protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCTAGCACCCCGGCTTGCAACATATAT
Internal bar code:AGGTTCTTTACGTTCCGTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:81.0982
LEAP-Seq n confirming:768
LEAP-Seq n nonconfirming:179
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGCAGTAGCAGGAGCG
Suggested primer 2:GAACCCACTACCTTCCGTGA