Insertion junction: LMJ.RY0402.172652_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.172652
Chromosome:chromosome 10
Location:3105421
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g441650 (1 of 1) PF06650//PF16908 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGACGCTATGCAGGGCGGCGGCATCACC
Internal bar code:CTGTCGGTATCCTATCCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:99.511
LEAP-Seq n confirming:814
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGTTGATCAGCTGGAAG
Suggested primer 2:GGAGCTTTTCAACTTCACGC