Insertion junction: LMJ.RY0402.172872_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.172872
Chromosome:chromosome_10
Location:3199043
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g442600 XUV5,UAPA2 Xanthine/uracil/vitamin C permease-like antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):CATGCGTGCTGAACATCCTACACCACCAGT
Internal bar code:TAGACACGGGTCGCTAGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:99.7283
LEAP-Seq n confirming:1101
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCCTACGGGACTTTAC
Suggested primer 2:GTACTGGCCTGGGTAAACGA