Insertion junction: LMJ.RY0402.172872_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172872
Chromosome:chromosome_10
Location:3199134
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g442600 XUV5,UAPA2 Xanthine/uracil/vitamin C permease-like antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):ATGGGGAAATTCAACTTTGCTGACGCTTGC
Internal bar code:TGGTACCGACAGACCATGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCCTACGGGACTTTAC
Suggested primer 2:ACCTCATCATACCGCTGGAC