Insertion junction: LMJ.RY0402.172872_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172872
Chromosome:chromosome 10
Location:3199134
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g442600 UAPA2,XUV5 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGAAATTCAACTTTGCTGACGCTTGC
Internal bar code:TGGTACCGACAGACCATGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACCCTACGGGACTTTAC
Suggested primer 2:ACCTCATCATACCGCTGGAC