Insertion junction: LMJ.RY0402.173195_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.173195
Chromosome:chromosome 5
Location:1924967
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241634 HAV2 Histone H2A variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCTCCTTCCCCTCCTTGCCCGTCTTC
Internal bar code:GCAGGCACGTCATCCGGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:90.7244
LEAP-Seq n confirming:72184
LEAP-Seq n nonconfirming:7380
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGCACCATCAAATACT
Suggested primer 2:CCTTCATGTGTGACCCTCCT