| Common name: | HAV2 |
| Defline: | Histone H2A variant |
| Description: | |
| Synonyms: | g5329.t1,Cre24.g770550.t1.1,HAV2 |
| Chromosome: | chromosome 5 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| LMJ.RY0402.152692_1 | LMJ.RY0402.152692 | CDS | 58 | 5.5 |
| LMJ.RY0402.173195_1 | LMJ.RY0402.173195 | CDS | 73 | 5.5 |
| LMJ.RY0402.185260_1 | LMJ.RY0402.185260 | CDS | 58 | 5.5 |
| LMJ.RY0402.239581_1 | LMJ.RY0402.239581 | 5'UTR | 73 | 5.5 |
| PFAM: | PF00125 |
| PANTHER: | PTHR23430 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG1756 |
| Gene ontology terms:: | GO:0003677 |
| Best arabidopsis TAIR name: | AT1G08880.1 |
| Best arabidopsis TAIR symbol: | G-H2AX,GAMMA-H2AX,H2AXA,HTA5 |
| Best arabidopsis TAIR defline: | Histone superfamily protein |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Paromomycin, screen 3 of 6 ( 71% confidence (FDR = 0.29)) |
| Paromomycin, screen 4 of 6 ( 78% confidence (FDR = 0.22)) |
| Paromomycin, screen 5 of 6 ( 73% confidence (FDR = 0.27)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.