Insertion junction: LMJ.RY0402.185260_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185260
Chromosome:chromosome 5
Location:1940896
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g241634 HAV2 Histone H2A variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTGGTCACAACGGAGCTGGTGGCGGT
Internal bar code:TCTGAGGATCGCGGGGGCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:83.7858
LEAP-Seq n confirming:1111
LEAP-Seq n nonconfirming:215
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAAGTGACATCGTGTG
Suggested primer 2:AACAACACGGACTTGTTCCC