Insertion junction: LMJ.RY0402.175912_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.175912
Chromosome:chromosome 9
Location:4549841
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g396139 (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCCCACCAACACCACCTGGCGAGCCTG
Internal bar code:ACTACAAGCTACGACCGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:98.4859
LEAP-Seq n confirming:1366
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCACTGGGTTCTAGCAGT
Suggested primer 2:CCAGCCGAAAATAAACCAAA