Insertion junction: LMJ.RY0402.176807_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.176807
Chromosome:chromosome 3
Location:4558109
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGTGATGTGGTAAGGTATAAGGTGCCG
Internal bar code:GAATGTACACGTGGGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:37.5566
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:138
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTAAGGGGTGGTTGATT
Suggested primer 2:TGAGCTTTGGACTACCCCAC