Insertion junction: LMJ.RY0402.177446_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.177446
Chromosome:chromosome 1
Location:4122427
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGTTTGGCGTTGAAGCCGGCCTTGCCG
Internal bar code:CAATTTCGGCTTTGACAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:95.2756
LEAP-Seq n confirming:484
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTCATGTCCCACACACG
Suggested primer 2:GCATCTCTTAAATCGCTGCC