Insertion junction: LMJ.RY0402.177623_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.177623
Chromosome:chromosome 7
Location:2130740
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g326450 VPS5B (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACAACGCATCTACTCGTGAAGCCGTCA
Internal bar code:CACGTGATCGTGCCCTTTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:99.169
LEAP-Seq n confirming:358
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGTAGCAGCCATCAACG
Suggested primer 2:GGCAGGTTGTCGTGGAGTAT