Insertion junction: LMJ.RY0402.178716_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178716
Chromosome:chromosome 13
Location:2245363
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g578650 CPLD10,NUOAF5,HCF173 (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; PSII biogenesis protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCGAACATTTCCTCACCTGCCCCAGCG
Internal bar code:GTGCCGACGCCGCGAGCGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:99.3622
LEAP-Seq n confirming:779
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGCATGCCCAAGGAGAC
Suggested primer 2:GGGTAGTGGTGGTGGTTGTC