Insertion junction: LMJ.RY0402.178801_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.178801
Chromosome:chromosome 3
Location:4558990
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAGCAGAACAGGTGCGGAAAGGGGAGG
Internal bar code:GGTAGGCGTGGTATCTGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:89.589
LEAP-Seq n confirming:327
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGCATCGCAAGTAAAC
Suggested primer 2:ACGGGCGAGATGTGATAGTC