Insertion junction: LMJ.RY0402.178801_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.178801
Chromosome:chromosome_3
Location:4558990
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre03.g176833 sense CDS

Insertion site details

Flanking sequence (orientation from cassette outwards):CCCAAGCAGAACAGGTGCGGAAAGGGGAGG
Internal bar code:GGTAGGCGTGGTATCTGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:89.589
LEAP-Seq n confirming:327
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGCATCGCAAGTAAAC
Suggested primer 2:ACGGGCGAGATGTGATAGTC