Insertion junction: LMJ.RY0402.178971_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.178971
Chromosome:chromosome 3
Location:1951202
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g155650 CLC1 Clathrin light chain; (1 of 1) PTHR10639 - CLATHRIN LIGHT CHAIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCTGAATGGTCTAGTGACAAGTACGGC
Internal bar code:CAACCGTTCGGAATGTTTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:360
LEAP-Seq n nonconfirming:216
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTGGAGTGGAGGTCGT
Suggested primer 2:ATCCACACGCTCCCAGATAC