Insertion junction: LMJ.RY0402.179025_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.179025
Chromosome:chromosome 14
Location:3725980
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g632050 POB25,RPG1,RPGRIP1 Retinitis pigmentosa GTPase regulator-interacting protein 1; (1 of 1) PF11618 - First C2 domain of RPGR-interacting protein 1 (C2-C2_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAACTCGGCATTGTAAATTGCCGACCT
Internal bar code:CGGTTTTGCCCCGATCTGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:77.1111
LEAP-Seq n confirming:1041
LEAP-Seq n nonconfirming:309
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCTTAGGATGGTGGATG
Suggested primer 2:ATGAAGGTGCGGGTGTTTAG