Insertion junction: LMJ.RY0402.182107_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182107
Chromosome:chromosome 6
Location:5108451
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g281050 VPS5A (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGTCTTGCGGGGCTTTACTGCGCACT
Internal bar code:CCGTAGTCTCGATATCTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:114
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGACAGGTCTAATGGT
Suggested primer 2:ACTTCCAGTTTGGTTGCTGG